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 Forum index » Advanced Topics » Additional Software (PETs, n' stuff) » Engineering/Science/Simulation
Math Base - Basic Free Mathematic Software for Puppy Linux
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aarf

Joined: 30 Aug 2007
Posts: 3620
Location: around the bend

PostPosted: Tue 29 Jun 2010, 06:37    Post subject:  

finally got organised enough to test this:
lupu500 booted on external HD (sdb1) with /mnt/home/sage-4.3.1.sfs loaded by inclusion in Boot Manager (although didnt notice it being loaded in the boot dialog)
(also with openshot pets already installed which includes python. pupsave is 256 MB free space around 100MB)
Code:

# sage
----------------------------------------------------------------------
| Sage Version 4.3, Release Date: 2009-12-24                         |
| Type notebook() for the GUI, and license() for information.        |
----------------------------------------------------------------------

**********************************************************************
WARNING!  This Sage install was built on a machine that supports
instructions that are not available on this computer.  Sage will
likely fail with ILLEGAL INSTRUCTION errors! The following processor
flags were on the build machine but are not on this computer:

pni ssse3

Email http://groups.google.com/group/sage-support for help.
To remove this warning and make Sage start, just delete
     /sage-x.y.z-i686-Linux/local/lib/sage-flags.txt
**********************************************************************
#
(renamed to ssage-flags.txt)
# sage
----------------------------------------------------------------------
| Sage Version 4.3, Release Date: 2009-12-24                         |
| Type notebook() for the GUI, and license() for information.        |
----------------------------------------------------------------------
The Sage install tree may have moved.
Regenerating Python.pyo and .pyc files that hardcode the install PATH
(please wait at most a few minutes)...
Do not interrupt this.
Setting permissions of DOT_SAGE directory so only you can read and write it.
/sage-x.y.z-i686-Linux/local/bin/sage-sage: line 206: 10019 Illegal instruction     sage-ipython "$@" -i
#
# sage
----------------------------------------------------------------------
| Sage Version 4.3, Release Date: 2009-12-24                         |
| Type notebook() for the GUI, and license() for information.        |
----------------------------------------------------------------------
/sage-x.y.z-i686-Linux/local/bin/sage-sage: line 206: 11291 Illegal instruction     sage-ipython "$@" -i
#
sageerror.jpg
 Description   
 Filesize   22.74 KB
 Viewed   2449 Time(s)

sageerror.jpg

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emil

Joined: 10 Nov 2009
Posts: 618
Location: Austria

PostPosted: Tue 06 Jul 2010, 17:25    Post subject: ssse3  

Hi aarf,

Quote:
Code:
...
To remove this warning and make Sage start, just delete
     /sage-x.y.z-i686-Linux/local/lib/sage-flags.txt
...


try just to delete this file as suggested and see if it works.

If Sage starts, try

Code:
random_matrix(ZZ,300).det()


, which will test the ATLAS package.

you can also do a "sage -testall" (or similar syntax, don't know by heart) but this will take hours to complete.

Emil

PS: I haven't tested my earlier sage sfs package in Lupu - I didn't think it is possible. Do they run there (at least on machines wich support ssse3)?
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aarf

Joined: 30 Aug 2007
Posts: 3620
Location: around the bend

PostPosted: Wed 07 Jul 2010, 17:09    Post subject:  

going to http://www.murga-linux.com/puppy/viewtopic.php?t=52582
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Temon


Joined: 18 Mar 2010
Posts: 5
Location: Gijón - Spain

PostPosted: Wed 15 Sep 2010, 06:45    Post subject: GUI for Octave  

Hi!
I know that there are some tutorials to install QtOctave, but I'm too clumsy to achieve it. I cannot even install 'cmake', which is said to be needed. Is there another GUI for Octave that can be easier installed on Puppy?
I'm using Octave command line now, but I got used to the GUI at Ubuntu (home PC) which I cannot install at work.

Thank you and sorry for my English.
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Temon


Joined: 18 Mar 2010
Posts: 5
Location: Gijón - Spain

PostPosted: Thu 16 Sep 2010, 07:16    Post subject:  

Embarassed

As usual, I solve it right after asking for help!

I used "tgz2pet" with a QtOctavexxx.tar.gz file and everything is fine now.

Sorry and thanks, anyway!
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emil

Joined: 10 Nov 2009
Posts: 618
Location: Austria

PostPosted: Fri 05 Nov 2010, 06:43    Post subject: sage 4.6  

I made a sfs from the latest version, but moved it to a seperate threat
http://murga-linux.com/puppy/viewtopic.php?t=61543
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Ibidem

Joined: 25 May 2010
Posts: 527
Location: State of Jefferson

PostPosted: Sun 21 Nov 2010, 22:55    Post subject: Where's the R stuff gone?  

I tried getting the R tarball, but the site said there was no such file.
Same exact thing with the R pet, and the PMG pet.

So...I tried using the official packages from the R project (bin/linux/ubuntu/lucid/*.deb), which installed. But, trying to install Rcmdr or pmg shows a lot of packages that can't install.
The problem is along the lines of
**libs
sh: -f: file not found
ERROR: compilation failed for package .......
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emil

Joined: 10 Nov 2009
Posts: 618
Location: Austria

PostPosted: Tue 23 Nov 2010, 07:30    Post subject: Location of Packages  

Hi Ibidem and all,

Well the original download links are not working anymore, as stated in a previous post.

I have moved most of the work to
http://boxen.math.washington.edu/home/emil/MathSoftware/Puppy4

Also dingos Docupuppy server should still work
http://puppylover.netsons.org/dokupuppy/programs:math_apps

About Rcmdr and the other guis - this was done in puppy 431. I havent tried in 5xx Puppies. The Problem is: new Puppies are fine but its a moving target Wink ....
Although I tried to include some clues how I got it to work, maybe it helps with newer versions.

emil
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emil

Joined: 10 Nov 2009
Posts: 618
Location: Austria

PostPosted: Tue 14 Dec 2010, 17:02    Post subject: Update  

I want to post a brief update here:

In the meantime there is a second version of Sage Live:
http://murga-linux.com/puppy/viewtopic.php?t=62231

Download Arrea (decent speed)
www.mydrive.ch
Username download@sagelive
password: mathematics

I found gnuplot and octave working also for the 5 series of puppy
Download (a tad slow)
http://boxen.math.washington.edu/home/emil/MathSoftware/Puppy4/

I also found Lyx and Latex almost working in Lupu 511.
All what was necessary was to add a symlink
/usr/lib/libpng.so.3 --> /usr/lib/libpng.so
Download
http://boxen.math.washington.edu/home/emil/Latex/
its the Latex_Lyx_v09.sfs

emil
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standarddeviant

Joined: 23 Oct 2011
Posts: 8

PostPosted: Sun 23 Oct 2011, 09:27    Post subject:  

Firstly, a huge thanks to emil for doing all this. I'm currently using Lupu 5.2.8 and all the .pet files for just octave. It seems to be working great. Smile

That said, I have some need for the octave forge signal package. Using the devx .sfs file, I'm in the process of getting everything I need for that, but I was wondering, once I get the octave forge signal package up and running, is there any way to reduce all of that to a .pet file? Thoughts?

Currently, I've had to install (from source)
(octave) signal-1.0.11.tar.gz requires
(octave) miscellaneous-1.0.9.tar.gz
(octave) specfun-1.0.9.tar.gz
(octave) struct-1.0.9.tar.gz
(octave) optim-1.0.6.tar.gz
mpfr-3.1.0.tar.gz requires
gmp-5.0.2.tar.bz2 requires

And these are just the dependencies I know about. I know lupu is supposed to be able to harness the power of Ubuntu packages. Can I simply use "apt-get install octave-forge...." ?

All help is much appreciated Smile
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emil

Joined: 10 Nov 2009
Posts: 618
Location: Austria

PostPosted: Sun 23 Oct 2011, 10:22    Post subject:  

Hello standarddeviant ,

thanks for the nice feedback Very Happy.

I am very sorry, there is no apt get in Puppy Linux which works properly.
Package managment is kind of "hand crafted" and "take what you can" from the base distro.

About your question with the creation of pet packages:

When compiling from source, most of it boils down to use

Code:
new2dir make install


instead of

Code:
make install


new2dir is an automated script that creates pet packages parallel to installing the package. There is even a switch to automate the creation of seperate bin, dev, doc and lang packages.

this will create a seperate directory (with ending packagename-i486 or similar) and the required pet package

Now how to combine all those single pet packages? A crude way to do it is:
make a new target directory
Code:
mkdir octave-signal-i486

then go to directory of each Package you want to combine and copy its content in the new directoy

Code:
cp -vnr * ../octave-signal-i486   # verbose, no clobber, recursive


edit the pet.specs textfile in the new directory
(Attention: some pets have install and uninstall scrips in here, so you might need to fix this file properly)

after everything is in place go to the parent directory and do

Code:
dir2pet octave-signal-i486
# sidenote: there is no pet2dir command, you have to use pet2tgz and then extract.
# if you want to create an sfs file use dir2sfs

If you search this forum you surly will find some tools and scripts which automate this "pet combination".

To learn more about it, the post pet packaging 001 by technosaurus is the
best starter on the topic http://murga-linux.com/puppy/viewtopic.php?t=35507

this guide also contains information of stripping and further optimization of "puppy size" packages.

nice to see you here. Would be Cool if we could get a signal processing pet, or in the future an Octave toolbox sfs!

hope this info helps a bit - kind regards
emil

PS: maybe post about Octave related news in new Octave thread. This old thread is kind of a mess, but it has a lot of hits and quite good google rank. Maybe I fix the first post to screen the current situation a bit better.
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recobayu


Joined: 15 Sep 2010
Posts: 114
Location: indonesia

PostPosted: Fri 27 Jan 2012, 22:34    Post subject: run geogebra 5 on puppy  

how to run geogebra 5 on puppy?
http://www.geogebra.org/
the type file of geogebra 5 beta is .jar
i use this code but not working
Code:

java geogebra.jar

what should i do?
thanks in advance
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emil

Joined: 10 Nov 2009
Posts: 618
Location: Austria

PostPosted: Sat 28 Jan 2012, 03:46    Post subject:  

geogebra is written in java.

You need to install the java runtime environment.
either download it directly from oracle or use one of the sfs packages here

http://puppylinux.org/wikka/JavaRuntimeEnvironment

Cool emil
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recobayu


Joined: 15 Sep 2010
Posts: 114
Location: indonesia

PostPosted: Mon 30 Jan 2012, 11:16    Post subject:  

emil, thanks for your fast answer, but i still confuse how to run the geogebra.jar
i downloaded from repository lucid, here
http://distro.ibiblio.org/puppylinux/pet_packages-lucid/java_jre-6u22-Lucid-sfs4.sfs
i load that sfs by right click, sfsload.
then in terminal, i type this:
Code:
java geogebra.jar

but still not run.
how to run it?
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emil

Joined: 10 Nov 2009
Posts: 618
Location: Austria

PostPosted: Mon 30 Jan 2012, 17:03    Post subject:  

Download the Unix package from the homepage (it is a tar.gz archive). Unpack it. go into the directory and run the "geogebra" shell script.
java geogebra.jar will not work.
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